Bits and Pieces for the Carpentries Workshops
A collection of Jupyter Notebooks, short references, and recommendations for Carpentries workshops.
Use the sidebar on the left to navigate to the individual materials.
Python Notebooks
| Topic | Content |
|---|---|
| Python Basics | Introduction to Python |
| Pandas & Statistics | Data analysis, visualization, hypothesis testing |
| APIs | DOI, ISBN, PubMed, Crossref, DataCite |
| Machine Learning | PCA, t-SNE, classification, regression |
| Web Scraping | Beautiful Soup, HTML |
| Object-Oriented Programming | Classes, objects, inheritance |
| Python Functions | ISBN validation and cleaning |
| Regular Expressions | Extracting data from XML files |
| Miscellaneous | PubMed search |
Short References
Compact cheat sheets to look things up during and after the workshop: Git, Markdown, Python, and Shell.
Recommendations
A curated list of libraries, books, podcasts, videos, editors/IDEs, and tips & tricks around the workshop topics.
Source Code
The source code of these materials is available on Codeberg.